[ofa-general] Problems using ofed 1.4.2 and Infinipath cards

Ole Widar Saastad o.w.saastad at usit.uio.no
Wed Aug 26 02:09:21 PDT 2009


I am experiencing problems using the Infinipath cards and the OFED
stack. (details are given below). 

It seems to be a problem somewhere when mpi packet size grows above 2k.
This is what I recall the changeover from one transport mechanism to
another ?

The test is easy to run and to test, it is just a bandwidth program :
(I got far better latency using the Pathscale stack that the OFED. Is this 
something that will be looked up in the newer releases?).

Two nodes in node.txt file compute-1-0 and compute-1-1. They are connected
to a SilverStorm switch.

[olews at login-0-2 bandwidth]$ mpirun -np 2 -machinefile ./nodes.txt ./bandwidth.openmpi.x -b o
Resolution (usec): 2.145767
Benchmark ping-pong
===================
        lenght     iterations   elapsed time  transfer rate        latency
       (bytes)        (count)      (seconds)     (Mbytes/s)         (usec)
--------------------------------------------------------------------------
             0          10046          0.121          0.000          6.011
             1          10261          0.124          0.166          6.026
<cut a few lines>
          1024           7695          0.140        112.615          9.093
          1536           6260          0.133        144.469         10.632
          2048           5275          0.128        168.420         12.160
[0,1,0][btl_openib_component.c:1375:btl_openib_component_progress] from compute-1-0 to: compute-1-1 error polling HP CQ with status RETRY EXCEEDED ERROR status number 12 for wr_id 278309104 opcode 1
--------------------------------------------------------------------------
The InfiniBand retry count between two MPI processes has been
exceeded.  "Retry count" is defined in the InfiniBand spec 1.2
(section 12.7.38):

    The total number of times that the sender wishes the receiver to
    retry timeout, packet sequence, etc. errors before posting a
    completion error.

This error typically means that there is somethin/site/VERSIONS/openmpi-1.2.8.gnu/bin/g awry within the
InfiniBand fabric itself.  You should note the hosts on which this
error has occurred; it has been observed that rebooting or removing a
particular host from the job can sometimes resolve this issue.  

Two MCA parameters can be used to control Open MPI's behavior with
respect to the retry count:

* btl_openib_ib_retry_count - The number of times the sender will
  attempt to retry (defaulted to 7, the maximum value).

* btl_openib_ib_timeout - The local ACK timeout parameter (defaulted
  to 10).  The actual timeout value used is calculated as:

     4.096 microseconds * (2^btl_openib_ib_timeout)

  See the InfiniBand spec 1.2 (section 12.7.34) for more details.
--------------------------------------------------------------------------
mpirun noticed that job rank 1 with PID 9184 on node compute-1-1 exited on signal 15 (Terminated). 
[olews at login-0-2 bandwidth]$ 


Background information :


07:00.0 InfiniBand: QLogic, Corp. InfiniPath PE-800 (rev 02)
        Subsystem: QLogic, Corp. InfiniPath PE-800
        Flags: bus master, fast devsel, latency 0, IRQ 66
        Memory at fde00000 (64-bit, non-prefetchable) [size=2M]
        Capabilities: [40] Power Management version 2
        Capabilities: [50] Message Signalled Interrupts: 64bit+
Queue=0/0 Enable+
        Capabilities: [70] Express Endpoint IRQ 0

compute-1-0.local# uname -a
Linux compute-1-0.local 2.6.18-92.1.13.el5 #1 SMP Wed Sep 24 19:32:05
EDT 2008 x86_64 x86_64 x86_64 GNU/Linux
compute-1-0.local# 


compute-1-0.local# rpm -qa| grep ofed
libibverbs-utils-1.1.2-1.ofed1.4.2
librdmacm-utils-1.0.8-1.ofed1.4.2
libcxgb3-1.2.2-1.ofed1.4.2
ofed-scripts-1.4.2-0
libmlx4-1.0-1.ofed1.4.2
libibverbs-devel-1.1.2-1.ofed1.4.2
ofed-docs-1.4.2-0
ibvexdmtools-0.0.1-1.ofed1.4.2
libmthca-1.0.5-1.ofed1.4.2
libipathverbs-1.1-1.ofed1.4.2
mstflint-1.4-1.ofed1.4.2
libibumad-1.2.3_20090314-1.ofed1.4.2
libnes-0.6-1.ofed1.4.2
libibcommon-1.1.2_20090314-1.ofed1.4.2
libibverbs-1.1.2-1.ofed1.4.2
librdmacm-1.0.8-1.ofed1.4.2
qlgc_vnic_daemon-0.0.1-1.ofed1.4.2
compute-1-0.local# 

OpenMPI is :
openmpi-1.2.8 compiled for gcc.

-- 
Ole W. Saastad, dr. scient.
Scientific Computing Group, USIT, University of Oslo
http://hpc.uio.no







More information about the general mailing list